Conformational Fluctuation is a fundamental property of biological macromolecules like proteins in aqueous solution. In the past, few experimental methods yielded quantitative measurements of the conformational fluctuation of proteins. Recently, we have developed quantitative models for interpreting experimental data from hydrogen exchange measurements on proteins and force measurement of single protein-ligand complexes. It is shown that conformational fluctuation can be quantitatively understood in terms of molecular mechanics and thermodynamics.